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 When I run the PHP scanner the scan completes but no files are ever found.
I have done a chmod on my /tmp folder and added the .htaccess file as recommended. A log file is written to /tmp during the scan but it is 0 bytes.
I have it scripted to run every half hour and it is running.
The reports just never indicate it read even one file.

Thanks Davide.
How am I supposed to know it worked though? It seems like the email it sends out should at LEAST indicate how many files were scanned. I thought that's what "total files" meant. And I am modifying PHP files via FTP, but it isn't picking up the changes.

The emails say:
Total Files: 0
Modified: 0
Added: 0

Also, there doesn't seem to be documentation for /index.php?option=com_admintools&view=scanner
This configuration screen for the PHP scanner is blank by default. Do I need to enter a ".php" in the File "Types to be Scanned"?
What are the recommended min / max execution time settings?

Exactly what Default Settings do you want me to check?
Everything under: http://mysite.com/administrator/index.php?option=com_admintools&view=scanner
...in Basic Configuration is blank. Min/Max times are 0/180 with a runtime bias of 90.

Under Options the Calcuate Diffs setting is Yes.
Under Options the Show charts and graphs is Yes.

THANK YOU!
These settings worked.